Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADL-GYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
3FCK Chain:B ((55-221))
----------------------------------------------------------DVKVVILGQDPYHGPNQAHGLCFSVQRPVPP-PPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK--
General information:
TITO was launched using:
RESULT:
Template:
3FCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83886 for 1277 contacts (-65.7/contact) +
2D Compatibility (PS) -18224 + (NN) -13120 + (LL) 4864
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -128216.0 ( -100.40 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3FCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCK-query.scw
PDB file :
Tito_Scwrl_3FCK.pdb
: