Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAA---GRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPD-DDLAWNDLVRGPVTFAAGS-VPDFALTRA-----SGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAERIPKFAHLPTVLGE-GTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADD-HDLFGLDEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHH--IALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSVTDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDR-SMQRLRAARQLVGHA |
| 2CFO Chain:A ((1-482)) | -----TVRVRLAPSPTGNLHIGTARTAVFNWLYARHRGGKFILRIEDTDRERSRPEYTENILEGLQWLGLTWDEG--------PYFQSDRLDLYRQAIQTLLDKGLAYYCYCTPEELEALRAEQKAKGQAP--RYDNRHRHLTPEEQAAFEAAGRTPVIRFKIEDDRQIEWQDLVRGRVSWQGADLGGDMVIARAAPRGEIGYPLYNLVVVVDDIAMGITDVIRGEDHIGNTPKQILLYEAL---GA--TPPNFAHTPLILNSTGQ-KLSKRDGVTSISDFRAMGYLAPALANYMTLLGWSPPEGVGELFTLDLAAKHFSFERINKAGARFDWDKLNWLNRQYIQQLEPEEFLAELIPLWQGAGYAFDEERDRPWLFDLAQLLQPGLNTLREAIDQGAVFFIPSVTFDSEAMAQLGQPQSATILAYLLEHLPAEPALTVAMGQQLIQQ-AAKAAGVKKGATMRTLRAALTGAVHGPDLMAAWQILHQRGWDEPRLAAALKQAQT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228841 for 3733 contacts (-61.3/contact) +
2D Compatibility (PS) -51975 + (NN) -31375 + (LL) 1500
1D Compatibility (HY) -26800 + (ID) 9050
Total energy: -346541.0 ( -92.83 by residue)
QMean score : 0.498
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