Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYLDHAATTPMHPAAIEAMA-AVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDA-EPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLP-TAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMS--VVAME-----FGVP---MHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLR---RDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDP--MRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVA-QPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR |
| 3A9Y Chain:B ((21-425)) | --YMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP--TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188148 for 3328 contacts (-56.5/contact) +
2D Compatibility (PS) -41605 + (NN) -25545 + (LL) 1672
1D Compatibility (HY) -24000 + (ID) 6500
Total energy: -284126.0 ( -85.37 by residue)
QMean score : 0.442
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