Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSD-TTLHRHFNWVRSWYDF--AV---EG----IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL---GDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 3JR1 Chain:A ((18-284)) | --------------------QGMWKSISQVLAEQFGAY-YFIKHKE--KLYSGEMNEIWLINDE--------VQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNS---QGHSFLLLEALNKSKNKQ--------------------SSFTIFAEKIAQLHQIQGPD-KYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKH--NPKPSILHGNLWIENCIQVDD-KIFVCN-PACYWGDRECDIAFSSLF--------------E-PFP---TNFYQRYNEIYPLEEGYLERKLIYQLYYLLNF----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127603 for 1940 contacts (-65.8/contact) +
2D Compatibility (PS) -26850 + (NN) -6013 + (LL) 8556
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -163210.0 ( -84.13 by residue)
QMean score : 0.388
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