Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
5AWW Chain:G ((1-75))
----------MDLLYTLVILFYLGVAGLLVYLVLVQE-----------------------PKQGAGDLMGGSADLFSARGVTGGLYRLTVILGVVFAALALVIGLWPR
General information:
TITO was launched using:
RESULT:
Template:
5AWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3614 for 358 contacts (10.1/contact) +
2D Compatibility (PS) -8546 + (NN) -6124 + (LL) 2228
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -13178.0 ( -36.81 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_5AWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AWW-query.scw
PDB file :
Tito_Scwrl_5AWW.pdb
: