Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETF----ARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFET--RPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQ----VCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRD--------ELIRQLWQRAVIVLPAGA--DTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 1SZK Chain:D ((38-410)) | --------------------------------------------------VEGREYLDFAGGIAVLNTGHLHPKVV-------AAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLL-VTTGSEAVENAVKIARAATKR------------SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-----PCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGSGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGV-TGRA--EVMDAV--APGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIG-DVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183901 for 3051 contacts (-60.3/contact) +
2D Compatibility (PS) -38730 + (NN) -22358 + (LL) 6608
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -266381.0 ( -87.31 by residue)
QMean score : 0.463
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