Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEA-----------TRELIRGQAADTAFES-RTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
| 4LLS Chain:B ((59-284)) | --------------------------------------------------------------------TSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELV-----THPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTA---ALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGK----ATFVSLLGLDAARARAMSLIDE------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55247 for 1642 contacts (-33.6/contact) +
2D Compatibility (PS) -22900 + (NN) -14024 + (LL) 8572
1D Compatibility (HY) -6800 + (ID) 4500
Total energy: -94899.0 ( -57.79 by residue)
QMean score : 0.291
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