Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTP-IGHPAAIALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRYDYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
4J5I Chain:B ((8-288)) | ----VTVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAELLGTPTVAHPT---LAEGAEQLLPIDSRYDKANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPAPLRTLADNLWAVHTNR--------ISAEQRGYRQRFESDYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRLFQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGERSRVIAG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119443 for 2239 contacts (-53.3/contact) +
2D Compatibility (PS) -29864 + (NN) -18709 + (LL) 1672
1D Compatibility (HY) -28400 + (ID) 8900
Total energy: -203644.0 ( -90.95 by residue)
QMean score : 0.552
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