Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA---TFEDFDFTANPKLP-GAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGG-DVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
2QGZ Chain:A ((100-300)) | ----------------------------------------------------QKQAAISERIQLVSLPKSYRHIHLSDIDVNNASRMEAFSAILDFVEQYPSAEQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISKE----EIDAVKNVPVLILDDIGAVR-----DEVLQVILQYRMLEELPTFFTSNYSFADLERKWAW--QAKRVMERVRYLAREFHLEGANRR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78513 for 1332 contacts (-58.9/contact) +
2D Compatibility (PS) -18273 + (NN) -3231 + (LL) 4584
1D Compatibility (HY) -9200 + (ID) 1600
Total energy: -106233.0 ( -79.75 by residue)
QMean score : 0.520
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