Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
4HN1 Chain:D ((4-185))
-----LSIEGAWSQEPVIHSDHRGRSHEWFRGESFRQAFGHDFPVAQVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFLCSSGYAPAREHSVNPLDPDLGIAWP--DDIEPLLSDRDENAPTLATAERLGLLPTY-------------
General information:
TITO was launched using:
RESULT:
Template:
4HN1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105009 for 1420 contacts (-74.0/contact) +
2D Compatibility (PS) -19874 + (NN) -11869 + (LL) 1940
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -154262.0 ( -108.64 by residue)
QMean score : 0.778
(partial model without unconserved sides chains):
PDB file :
Tito_4HN1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HN1-query.scw
PDB file :
Tito_Scwrl_4HN1.pdb
: