Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPAARTRMTETVFAEMMAKPQEGFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
1ZBQ Chain:C ((28-265)) | ---FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGV-GKGSLAADKVVEEIRRRGGKAVANYDSV---EEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMK---------KQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVM------PEDLVEALKPEYVAPLVLWL-CHESCEENGGLFEVGAGWI------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113294 for 2136 contacts (-53.0/contact) +
2D Compatibility (PS) -26327 + (NN) -10617 + (LL) 2680
1D Compatibility (HY) -20000 + (ID) 5750
Total energy: -173308.0 ( -81.14 by residue)
QMean score : 0.559
|
|
|