Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQVCSQCGTGWNVRERQRVWCPRCR-------GMLLAPLADMPAEARWRTPARPQVPTASDTRRTPPRLPPGFRWIAVRPGAAPPPRHGPRLRGPTPRYAGIPRWGL--------TDHVDQAPVPASAKAGPSPAAVRTTLLVSLLVFSIAVVVFVVRYVLLVINRNTLLNSVVASASVWLGVLVSLAAI--AAAGTTIVLLVRWLVARRAAAFMHQGLPERRSARE------------LWAGCLLPMVNLLWAPLYVIELALVEDRYTRLRRPIVVWWIVWIVSNAISMFAF-ATSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFEGFEQKPVERPAHRWVVVNTDGRSAPASSVAVELDGQEPAA |
| 1W5C Chain:D ((1-350)) | MTIAIGRAPAERGWFDILDDWLKRDRFVFVGWSGILLFPCAYL-ALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQ-GDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRP-YNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVF-------PEEVLPRGN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96658 for 2071 contacts (-46.7/contact) +
2D Compatibility (PS) -32973 + (NN) -11061 + (LL) 1864
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -149978.0 ( -72.42 by residue)
QMean score : 0.047
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