Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
5EZG Chain:A ((26-218))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
5EZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96846 for 1358 contacts (-71.3/contact) +
2D Compatibility (PS) -21478 + (NN) -18279 + (LL) 1092
1D Compatibility (HY) -24800 + (ID) 9650
Total energy: -169961.0 ( -125.16 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_5EZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EZG-query.scw
PDB file :
Tito_Scwrl_5EZG.pdb
: