Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------MSAPAVAAGPTAAGATAARPATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEV-------LEDTPADVL-GGFDFTAQGVWAFARP------GSPPLKLDQSLDDAG----VVDGSLLTLVSVS-RTERY----------------RPLVEDVIDAIAV----LDESPEFDRTALNRFVGAAIP-----LLTAPVIGMAMRAW-WETGRSLWWPLAIGILGIAVLVGSFVANRFYQSGHLAECLLVTTYLLIATAAALAVPLPRGVNSLGAPQVA-----GAATAVLFLTLMTRG---GPRKRHELASFAVITAIAVIAA-----AAAFGYGYQDWVPAGGIAFGL-FIVTNAAKLTVAVARIALPPIPVPG------------------ETVDNEELLDPVATPEATSEETPTWQA--------IIASVPASAVRLTER---------------------SKLAK------QLLIGYVTSGTLI---LAAGAIAVVVRGHFFVH-------SLVVAGLITTV-CGFRSRLYAERWCAWALLAATVAIPTGLTAK--LIIWYPHYAWLLLSVYLTVALVALVVVGSMAHVRRVSPVVKRTLELIDGAMIAAIIPMLLWITGVYDTVRNIRF------------------------------------------------------------ |
| 4YU6 Chain:A ((1-754)) | NLIQEDRLAEALKERGTINPASSKEETKKAVEKYIEKKQGDQANKEILPADTAKEASDFVKKVKEKKMEEKEKVKKPEKNVSPEQKPEPNKKQ-LNGQVPTSKAKQAPYKGSVRTDKVLVLLVEFSDYKHNNIDQTPGYMYSNDFSREHYQKMLFGNEPYTLFDGSKVKTFKQYYEEQSGGSYTTDGYVTEWLTVPGKASDYGADGSSGHDNKGPKGARDLVKEALHAAAEKGLDLSQFDQFDRYDTNSDGNQNEPDGVIDHLMVIHAGVGQEAGGGKLGDDAIWSHRSKLAIDPVAIEGTKSKVDYFGGKV----AAHDYTIEPEDGAVGVFAHAFGHDLGLPDEYDTKYTGTGSPVEAWSLMSGGSWTGKIAGTEPTSFSPQNKDFLQKNMGGNWAKILEVDYDKIKRGVGVPTYIDQSVTKSNRP--GVVRVNLPGKSVETIKPEFGKHAYYSTRGDDMHTTLETPFFDLTKGTNAKFDYKANYELEAECDFVEVHAVTEDGTKTLIDRLGEKVVQGDKDTTDGKWIDKSYDLSQFKGKKVKLQFDYITDPAVTYKGFAMDHVNVTVDGQVVFSDDAEGQSKMNLNGFVVSDGTEKKAHYYYLEWRNYAGSDNGLKAGKGPVYNTGLVVWYADDSFKDNWVGVHPGEGFLGVVDS--HPEAFVGNLNGKPTYGNTGMQIADAAFSFDQTPAWSVNSLTRGQFNYSGLQGVTTFDDSKVYSNNQIADAGRKVPKLGLKFQVVGQADDKSAGAVWIKRHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -354256 for 3670 contacts (-96.5/contact) +
2D Compatibility (PS) -50526 + (NN) 24749 + (LL) 1280
1D Compatibility (HY) -1600 + (ID) 4850
Total energy: -385203.0 ( -104.96 by residue)
QMean score : 0.134
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