Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY |
| 1XSE Chain:A ((22-295)) | NEKFRPEMLQGKKVIVT----GASKGIGREIAYHLAK---MGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFA----EEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPMLMQS----QGSIAVVSSVAGKITYPL--IAPYSASKFALDGFFSTLRSEFLVN--KVNVSITLCILGLIDTETAIKATSGIYLGPASPKEECALEIIKGTALRQ--DEMYYVGSRWVPYLLGNPGRKIMEFLSAAEYNWDNVLSNEKLYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2462 for 2258 contacts (-1.1/contact) +
2D Compatibility (PS) -27259 + (NN) 10799 + (LL) 2068
1D Compatibility (HY) -2000 + (ID) 1950
Total energy: -20804.0 ( -9.21 by residue)
QMean score : 0.080
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