Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MKTFARL-AAGLCICAIASQANAWSQ-PTHKNIVKDALAFMNSSYATEEMRQ-AYRFYVSAA-GSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADV-DWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAK-ELIPESIALTVTVLTK-GANSFDAPTAL |
4G3A Chain:A ((5-231)) | KPSDLDGFIQQMPK--------------ADMRVKVQLAEDLVTFLSDDTNSIVCTDMG--FLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLG---------------SDFNAYTATVLPHVIDRLGDSR-------DTVREKAQLLLRDLMEHRVL--------------------------PPQALIDKLATSCFKHKN-------AKVREE-FLQTIVNALHEYGTQQLSVRVYIPPVCALLG---------------------------DPTVNVREAAIQTLVEIYKHV------GDRLRPDLRRMDDVPASKL-------AMLEQKFDQVKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9895 for 1617 contacts (-6.1/contact) +
2D Compatibility (PS) -22699 + (NN) -1825 + (LL) 6620
1D Compatibility (HY) -3200 + (ID) 2150
Total energy: -33149.0 ( -20.50 by residue)
QMean score : 0.213
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