Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERA--VVFDSAYCNSPLCAPSRFTLV--SGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMHFCGPDQ-----LHGYEERLTSDIYPADYGWAVNWDEPEVRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDMLGERG-----LWYKM--HWFE--MAARVPLLVHAPARFAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRRGDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP |
| 2W8D Chain:A ((29-339)) | -AEGKNVIYVSLESLQSFIIDYKI-DGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKTSDAEFMMENSLYPLAQGSVFVNKA-QNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNE---------------------------ENTKNYGMKDKPFFKESMPLLES-----LPQPFYTKFITLSNHFPFGMDEGDTD-F-----P-----------------------------AGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEITDYDNAQLQRVPLFIHAAGVK-GEKVHKYAGDVDVAPTILHLLGVDTKD-YLMSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEVDKSEDSLVKKELEMSDKIINGDLLRFYEPKGFKKVNPSDYDYTKH------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161115 for 2431 contacts (-66.3/contact) +
2D Compatibility (PS) -31197 + (NN) -16639 + (LL) 7336
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -215565.0 ( -88.67 by residue)
QMean score : 0.431
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