Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MFMKKLMLAVGLFAVAGSAFAAKPC----EELKAEIDAKIKANGV-PAY------TLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG----------------------------------
2OPE Chain:A ((28-147))
FEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLERFVSGYKMNPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTG---YTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAF
General information:
TITO was launched using:
RESULT:
Template:
2OPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18203 for 387 contacts (-47.0/contact) +
2D Compatibility (PS) -8146 + (NN) -8372 + (LL) 500
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -38421.0 ( -99.28 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2OPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPE-query.scw
PDB file :
Tito_Scwrl_2OPE.pdb
: