Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADID-ALIAGAAR-DGRALDRMLLGAVVEN--NDKKRFALSADGQRIRA-VQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRER--GLVPGSRHHVHLSARRA--TALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 5BP8 Chain:A ((6-520)) | APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPGKLGAWS--------GTTLTSPA-PDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPA----APGVAYLRDVQARFGGPVPSITPIVYFEQAWVLNSLAASGLRYEAPAALLDSLEAGLT--------DEGIAAAPGLPSDSDDTAAVLFALAQHGRTHRPDSLMHFRRDGYFSCFGVERTPSTSTNAHILEALGHHVTVRPDDAGRYGAEIRMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRADGSWGRWQGTTEETAYMVQLLMRTRTPGSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23863 for 1016 contacts (-23.5/contact) +
2D Compatibility (PS) -16897 + (NN) -2326 + (LL) 2044
1D Compatibility (HY) 4000 + (ID) 1350
Total energy: -38392.0 ( -37.79 by residue)
QMean score : 0.056
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