Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWVGARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSFAQAWLTRAAAAFVERYPGTAIDLQVNSQ--VV-NLVEERIDLALRIANQLDPNLIARRLGECRSVICAAPDYLRRH--GTPRRPEDLALHNCLTYSYFG-RS-LWQFERDGEPTSVPVGGSLSANESTVLLEAAAAGAGISQQPLYSAAPLIRSGRLVALLPEWSPQVLGIHAVYASRRQMPPALRALLDFLVERMAADPHWDEAGPLALA |
2H9B Chain:A ((89-295)) | ------------------------------------------------------------------------------------------EKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKHSLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQSIQLFNLSYVPLLD--PDAITPIYIAVRNME-ESTYIYSLYETIRQIYAYEGFTEPPNW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87550 for 1527 contacts (-57.3/contact) +
2D Compatibility (PS) -21314 + (NN) -10492 + (LL) 8200
1D Compatibility (HY) -2400 + (ID) 1850
Total energy: -115406.0 ( -75.58 by residue)
QMean score : 0.379
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