Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAR--------EPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFY------LRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLD-----------DAAKRAGKAA-EFQRLRREYAALSQREWGGESPFKA-WIDAPFNNAKLLPFGLYDQWVAAFAVLFRQ-VGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP |
| 3B34 Chain:A ((203-468)) | ----------------------------------------------KPCYLFALVAGDFDVLRDTFTTRSGREVALE-LYVDRGNLD-----------RAPWAMT-SLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENK----GLNIFN----------SKYV---------------------LARTDTATD--KDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRT--------MRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEEN--FQKGMQLYFERHDGS---A----------ATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQYT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8467 for 1814 contacts (-4.7/contact) +
2D Compatibility (PS) -25085 + (NN) -5510 + (LL) 9396
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -33816.0 ( -18.64 by residue)
QMean score : 0.189
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