Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENRVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGL-AAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
3SD7 Chain:A ((26-239))
----KKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKED-LENLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL--
General information:
TITO was launched using:
RESULT:
Template:
3SD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164872 for 1782 contacts (-92.5/contact) +
2D Compatibility (PS) -23518 + (NN) -13065 + (LL) 376
1D Compatibility (HY) -22800 + (ID) 4900
Total energy: -228779.0 ( -128.38 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3SD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SD7-query.scw
PDB file :
Tito_Scwrl_3SD7.pdb
: