Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------MRAGLLLSLAWAD-------------------YRGEARLSLCAIFALAAVITPLL------------------VLFGLKYGLVSTLTERLERAPSVREIIPVGGARY-----------RAEDIAALAARAD----VAFAVPRTRQIAATADLSGG---------GETALSVEMIPSAAGDPLLAGLPQPDRPTRVVLSHGAAEKLGAQPGERIVARIGRRMDGQAQSQRLELEVLAVLPQERFARDALFAPLALLEAAEDYRDGRAVAAYGWPGKAGETPRARIYPGFRLYARDLDAVEGL-----RRHFVASGVEVATQAEAIAQ----VRSLSRNLGLVFWIVAALAIGGAFAAIAASSLAAVERKRRALAVLRLLGFPTAALVGFVMLLA--LFSAVFGLFLAGLLYAATAGALNHLFDNQ-SGEFVCRLLPSHYLTALLATLLCSVLAAASGGWRAARIEAAEGLRDV----------------- |
| 3J5P Chain:A ((1-564)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPN--RHDMLLV------EPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPV---EGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98490 for 2559 contacts (-38.5/contact) +
2D Compatibility (PS) -40683 + (NN) -14809 + (LL) 820
1D Compatibility (HY) -23200 + (ID) 3600
Total energy: -179962.0 ( -70.33 by residue)
QMean score : 0.091
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