Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDAA---APVVAYPGCPSEHGLAAATTTQLSR---ADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
1GUT Chain:A ((6-62))
------------------RNQLKGKVVGLKKGVVTAEVVLEIAG---GNKITSIISLDSVEELGVKEGAELTAVVKSTDVMILA-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27826 for 269 contacts (-103.4/contact) +
2D Compatibility (PS) -5577 + (NN) -90 + (LL) 6408
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -28935.0 ( -107.57 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1GUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GUT-query.scw
PDB file :
Tito_Scwrl_1GUT.pdb
: