Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MDAHRLSIAAIVDQHAEEAAFLA----------LLRDYAVRAPHYDLEELAELD------QRIE------AHLDGLAI--AGQAGHDALLEQLDAHAQGEAFALAVLAMQAG----------------DDALIGRMRACLAASPEARRGFAAALGWLDWDQARPWVERLLAS-------PEPLFRAIGLAACGMHRHDPG------PALLSALGHAD-------PAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRF-------------WANWATAQMGDEEALGPL-------------RAFAG-------------QPGPFQLPATMVLLA---------WQPRDTSMAWI-----RQLMQAADTRRIGIQATGLFGDPVAVPWLIQQMRDESLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
4K0V Chain:A ((1-514)) | AMDLILINSLPLVSDAETSLTCIASGWRPHEPITIGRDFEALMNQHQDPLEVTQDVTREWAKKVVWKREKASKINGAYFCEGRVRGEAIRIRTMKMRQQAS-FLPATLTMTVDKGDNVNISFKKVLIKEEDAVIYKNGSFIHSVP---RHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVNT-VAGMVEKPFNISVKVLPKPLNAPNVIDTGHNFAVINISSEPYFGDGPI----KSKKLLYKPVNHYEAWQHIQVTNEIVTLNYLEPRTEYELCVQLVRRGEGGEGHPG--PVRR----F |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56438 for 2717 contacts (-20.8/contact) +
2D Compatibility (PS) -39237 + (NN) 17317 + (LL) 1464
1D Compatibility (HY) -6400 + (ID) 3200
Total energy: -86494.0 ( -31.83 by residue)
QMean score : -0.031
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