Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQ--DGQAVSTASLKGRWHLLFFGYTFCPDVCPT-TLAQLRELQGKLPQEVRDDLQVVFVSVDPNR---DTPQQIKQYLGYFNAGFQGLTGTPENI--QKLANAMSIPYIPADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
3EYT Chain:A ((2-154))
-----------------------------------------------NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCP-GCVMHGIPLAQKVRAAFPED---KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGT--------------PSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEAA
General information:
TITO was launched using:
RESULT:
Template:
3EYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93424 for 1085 contacts (-86.1/contact) +
2D Compatibility (PS) -15883 + (NN) -15144 + (LL) 5244
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -127207.0 ( -117.24 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3EYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYT-query.scw
PDB file :
Tito_Scwrl_3EYT.pdb
: