Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLG-------VTRHVLADRLKRLVEAEILAKVPYQER---PLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
2E1N Chain:A ((34-118))
----------------------LAVCYVLAVLRHEDSYGTELIQHLETHWPNYRLSDTVLYTALKFLEDEQIISGYWKKVEGRGRPRRMYQLAQANDDRSRDLAQLWERYL--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E1N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64549 for 491 contacts (-131.5/contact) +
2D Compatibility (PS) -7805 + (NN) 998 + (LL) 4784
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -70422.0 ( -143.43 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_2E1N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E1N-query.scw
PDB file :
Tito_Scwrl_2E1N.pdb
: