Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEI-----PASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAML----------WLGGWWQPGDWLQDWRADYVAAPGQ---VAEWKLADGSYLSLDA-------GSAVRVRIDGGQRRVELLRGAAALR----VKRDALP----FVVEAGEGRARVLGTEFEVRRG----AGATRVTVLQGRVAVSAGT------GAGAAEEV----LGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPL---------------AEVLDELARYY------PGRILLLDDALGRQPVSGSFRSDDPEAAL-----KSLQAVLGYRQQILFG-RLVVIR------------------- |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYK--MQETRRAIVFALLNEKDL-TKDDVEILKRAYEKLTDNFQR-EMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLL-WPIIMSRVD-LFSILANYHPKGKETFLKEYEDTVKFLKTFISSEAITGKKPIFITDWDGTMKDYCSQYATNLQPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMPIDGPVMFSGSWGREWWLSGKRVVHQDGITDEGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGDSLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37845 for 2157 contacts (-17.5/contact) +
2D Compatibility (PS) -34686 + (NN) -6110 + (LL) 496
1D Compatibility (HY) -18400 + (ID) 3150
Total energy: -99695.0 ( -46.22 by residue)
QMean score : 0.110
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