Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MSGYAERATTRRRQAGFTLIEVMVAIMLM----AIVSLMAWRGLDSIARASAHLEDS------TEQGAALLRALNQLERD-IALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLP--LPPLAERVAVLDDVSRFDIRAWVPGKGWTRLP--ARSKVRASGLEISLARVTRNGVERY-----RRVVALQ------------------- |
| 4QFR Chain:C ((28-322)) | YTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESG--------NTLYILTHKRILKFLKLFITSLEELQIGTYANIAM-----VRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48474 for 1241 contacts (-39.1/contact) +
2D Compatibility (PS) -20198 + (NN) 5191 + (LL) 596
1D Compatibility (HY) -12800 + (ID) 2050
Total energy: -77735.0 ( -62.64 by residue)
QMean score : 0.197
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