Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADREVGTVKWFNDAKGYGFIQ---RDSGP-----DVFVHYRAIRGEGHRSLVEGQKVEFSVIQGQKGLQAEDVSKV
4A76 Chain:E ((8-79))
---RGSGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVTGP
General information:
TITO was launched using:
RESULT:
Template:
4A76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36200 for 398 contacts (-91.0/contact) +
2D Compatibility (PS) -6950 + (NN) -1681 + (LL) 276
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -50855.0 ( -127.78 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_4A76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A76-query.scw
PDB file :
Tito_Scwrl_4A76.pdb
: