Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCELLGMSANVPTDIVFSFTGLMQRGGGTGPHRDGWGIAFYEGRG-VRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQ-ANVGKVGL-SNTHPFIRELGGRYWTFAHNGQLAD-FQPKPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISACDEYRKKG-VFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEPLTDNENWTLQQSGE-WVLWWGGEVLAKGRV |
| 3MDN Chain:A ((2-257)) | ----CRWAAYHGTPIFLEDV-------------IGFGVAWYDARPEPGLYRDVYPAWSDPNLRAVAHH-VRSGLFLSHVCHPFAARRWCFMHN---------GQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLALSEGLEHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG---------QTLYAARYSSDHIAP--------SVYYRYSHARQGWAVVSEPLDEG-DWTELRPGRMLTIGAEGAAERDFAP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26168 for 1666 contacts (-15.7/contact) +
2D Compatibility (PS) -21192 + (NN) -405 + (LL) 2032
1D Compatibility (HY) 7200 + (ID) 1050
Total energy: -39583.0 ( -23.76 by residue)
QMean score : 0.123
|
|
|