Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLR--RLRFGQRQDWADTPILRAN--GLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 3KBR Chain:A ((25-236)) | --------------------------------------YKPFSY--RTEEGGYAGFDVDMAQRLAESLGA---KLVVV--PTSWPNLMRDFADD--RFDIAMSGISINLERQRQAYFS-IPYLRDGK---TPITLCSEEA---RFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPE---LCAVHPQPF--DFAEKAYLLPRD-EAFKRYVDQWLHIAEQSGLLRQRMEHWL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120613 for 1521 contacts (-79.3/contact) +
2D Compatibility (PS) -22046 + (NN) -3745 + (LL) 6772
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: -142982.0 ( -94.01 by residue)
QMean score : 0.571
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