Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIFNPNPGNT-----LDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI----
2G0U Chain:A ((1-92))
MSNPPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTK--NPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDIDSSILEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2G0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1320 for 436 contacts (-3.0/contact) +
2D Compatibility (PS) -8778 + (NN) -4820 + (LL) -24
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -18692.0 ( -42.87 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2G0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0U-query.scw
PDB file :
Tito_Scwrl_2G0U.pdb
: