Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAQLIDGKAIAANLRQQIAQRVTER-----RQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLS--QAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGADLYGM---DAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD
3NGL Chain:C ((7-271))----------------EEIAEKKAENLHGIIERSGLE-PSLKLIQIGDNEAASIYARAKIRRGKKIGIAVDLEKYD---DISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIM-----DYYGYHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVND-KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQKN


General information:
TITO was launched using:
RESULT:

Template: 3NGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176264 for 2084 contacts (-84.6/contact) +
2D Compatibility (PS) -28355 + (NN) -15903 + (LL) 1892
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -244830.0 ( -117.48 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_3NGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NGL-query.scw
PDB file : Tito_Scwrl_3NGL.pdb: