Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELVMALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT
4IHG Chain:H ((6-75))
---IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING----
General information:
TITO was launched using:
RESULT:
Template:
4IHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47048 for 472 contacts (-99.7/contact) +
2D Compatibility (PS) -7610 + (NN) -4155 + (LL) 600
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -67163.0 ( -142.29 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_4IHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHG-query.scw
PDB file :
Tito_Scwrl_4IHG.pdb
: