Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEYLPTSTANGLPHNLQRGERLASIGAGLVLAGFGLARGGLPGACKAVAGGLLVSRGLSGHCHVKGLLNEPREELQLLREEVQHLTRRLQRLQERQRDDSRQDAALDAELPPNLP
2YY0 Chain:A ((57-94))
----------------------------------------------------------------------PENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQYE--------
General information:
TITO was launched using:
RESULT:
Template:
2YY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10150 for 151 contacts (67.2/contact) +
2D Compatibility (PS) -4538 + (NN) -4343 + (LL) 2888
1D Compatibility (HY) -3200 + (ID) 350
Total energy: 607.0 ( 4.02 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2YY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YY0-query.scw
PDB file :
Tito_Scwrl_2YY0.pdb
: