Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYL--------------WGPVGRGKTWLM-----------DH-FYQCLRVPARRQHFHHFMQW-------VHQRQFELTGTADPLRALARELARDVRVLCF----------DELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQPPEQLYADGFNRERFLPAIEAIQRHM--AVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFA--------RLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDF-IGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG-------------------------------------------------------------------------------------------------- |
3C9F Chain:A ((5-550)) | SFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALKHEVDLIIIVGHTPISH------NWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRYCETVGWTSVNLDKADLNLPVRQRFSRSYIDFNTDSFKYHTNLDKEFDTAKGKLVSKLIRETRKELKLDTLIGYVKTNYYVDYVPIDHPKSIFNLLALKILKTLPKSKHEERITIINTGSIRYDLYKGPYTIDSKFIVSPFENIWVNITVPKSVATKVAAKLNDYISASRLKPPHQYDLQVQQEKLPKGYVTHDDFGADGDDTLHRAVVNFPVPNVIQSVEINDEVDSPVNLVFYSFITPNIIWALKELNFSTEQVPTPYSDIYLGTLLNEFVANNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90072 for 2749 contacts (-32.8/contact) +
2D Compatibility (PS) -39189 + (NN) 376 + (LL) 296
1D Compatibility (HY) -4000 + (ID) 1700
Total energy: -134289.0 ( -48.85 by residue)
QMean score : 0.090
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