Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITG-----IQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTLKGDSGTYTC-DALIIATGASAQYLGMSSEEAFMGKGVSACATCDGF--FYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEMRD-GYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
4CCR Chain:C ((7-314)) | --------VVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPK---IEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEG------PKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204511 for 2541 contacts (-80.5/contact) +
2D Compatibility (PS) -32188 + (NN) -9745 + (LL) 120
1D Compatibility (HY) -29200 + (ID) 6500
Total energy: -282024.0 ( -110.99 by residue)
QMean score : 0.492
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