Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALG-IE-GVERLAVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP--DDTEMQRLLEKADLYLVPNMNPDGAFHGN-----LR--------TNAAGQDLNRAWLE------------------PSAERSPEVWFVQQEMKRH-GVDLFLDIHGDEEI-PHVFAAGCEGNPGYTPRLERLEQRFREELMARGEFQIRHGYPRSAPG---QANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
| 1AYE Chain:A ((100-397)) | ----------------------------------------------------------------------------------------------------------FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG-GDKPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDD-FDELSEVAQKAAQSLRSLH----GTKYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFELRDTG-----RYGFLLPARQILPTAEETWLGLKAIMEHVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111180 for 2177 contacts (-51.1/contact) +
2D Compatibility (PS) -28177 + (NN) -13443 + (LL) 7320
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -157380.0 ( -72.29 by residue)
QMean score : 0.522
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