Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRH-PLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPV--RDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALWL-SGYLFHPWP-GPGSLPADIEPRHLRG-RWLRQRDWPAYLASLAGPQTGQHWLHLSRE--HWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPRDGYWVEAERLFLASDDW-----PPGLSLWGSARQAADA--- |
| 3THI Chain:A ((1-362)) | ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQAEDVLPFALQGAKRNGEVYG--LPQILCTNLLFYRKG--DLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASMYLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLP--ARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73506 for 2496 contacts (-29.4/contact) +
2D Compatibility (PS) -33403 + (NN) -21576 + (LL) 660
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -143375.0 ( -57.44 by residue)
QMean score : 0.180
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