Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNVRAYQDRGLLPPPER-RGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFDGERMKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
1R8D Chain:A ((16-73)) | IRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16542 for 315 contacts (-52.5/contact) +
2D Compatibility (PS) -6496 + (NN) -6470 + (LL) 12224
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -22934.0 ( -72.81 by residue)
QMean score : 0.734
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