Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGD-PDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPY--EG-F-----EYSPNIVYGGPAPNQNSAPLAAYLIRH-------YG-ERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTV-VGTGTAELYRAIARRYGDGRRPPIASLTTSEAEV-AKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSW-------RVEDVQRHLYDICIDAPQGPVRVERQNNHSR------------LSSRIAEIDARG--VFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3H5L Chain:A ((41-426)) | -----DPVVIGCPAPLTGIVAADGIEFQRGIQMAADEINAVGGILGRPIELVFADTQSKGVDVVIQSAQRLIDRDNASALIAGYNLENGTALHDVAADAGVIAMHANTVAVHDEMVKSDPDRYWGTFQYDPPETLYGGGFLKFLKDIEDNGEFSRPNNKIAIITGPGIYSVNIANAIRDGAGEYGYDVSLFETVAIPV--SDWGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNS--LVYLQYGASLAAFRDIAG-DNSVGVTYAT-VLGTLQDEMGDAFAKAYKERYGDLS-STASGCQTYSALYAYSIAAALAGGPGAPYDDVQNKAVADRLRSLIFRGPVGTMRFHADTQSAWSYPTETNDPSLGMPHIFSQIF-DKAEDGVLIAPAPY-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212320 for 3097 contacts (-68.6/contact) +
2D Compatibility (PS) -37817 + (NN) -20915 + (LL) 876
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -280626.0 ( -90.61 by residue)
QMean score : 0.666
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