Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLIDPRAIIDPSARLAADVQVGPWSIVGAEVEIGEGTVIGPHVVLKGPTKIGKHNRIYQFSSVGEDTPDLKYKGEPTRLVIGDHNVIREGVTIHRGTVQDRAETTIGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGYTLVHQYCRIGAHSFSGMGSAIGKDVPAYVTVFGNPAEARSMNFEGMRRRGFSSEAIHALRRAYKVVYRQGHTVEEALAEL-AESAAQFPEVAVFRDSIQSATRGITR
4E6T Chain:B ((38-294))
--LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGASLILKDVPAYVMASGNPAHAFGINIEGMRRKGWSKNTIQGLREAYKLIFKSGLTSVQAIDQIKSEILPSVPEAQLLIDSLEQSERGIVR
General information:
TITO was launched using:
RESULT:
Template:
4E6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182831 for 2279 contacts (-80.2/contact) +
2D Compatibility (PS) -27595 + (NN) -10190 + (LL) 180
1D Compatibility (HY) -22800 + (ID) 6500
Total energy: -249736.0 ( -109.58 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_4E6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E6T-query.scw
PDB file :
Tito_Scwrl_4E6T.pdb
: