Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLR-------RPTMEEIGYRTDIFELQEKMQSAGLPV
3UK6 Chain:A ((190-261))
-------------------------------------------------PGVLFIDEVHMLDIESFSFLNRALES---D----MAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSE------
General information:
TITO was launched using:
RESULT:
Template:
3UK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20606 for 351 contacts (-58.7/contact) +
2D Compatibility (PS) -6717 + (NN) -1500 + (LL) 5256
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -26667.0 ( -75.97 by residue)
QMean score : 0.166
(partial model without unconserved sides chains):
PDB file :
Tito_3UK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UK6-query.scw
PDB file :
Tito_Scwrl_3UK6.pdb
: