Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
1R1F Chain:A ((1-37))
----------------------------------------TFCGETCRVIPVCTYSAALGCTCDDRSDGLCKRNGDP---
General information:
TITO was launched using:
RESULT:
Template:
1R1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7408 for 230 contacts (32.2/contact) +
2D Compatibility (PS) -3970 + (NN) -2365 + (LL) 4416
1D Compatibility (HY) -400 + (ID) 450
Total energy: 4639.0 ( 20.17 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1R1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1F-query.scw
PDB file :
Tito_Scwrl_1R1F.pdb
: