Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIE--SGIDSDETLAAAVGSDAER---IHRLMRLLVAFEIFQGD----------TRDGYANTPTSHLLR-DVEGSFRDMVLFYGE-EFHAAWTPACEALLSGTPG--FELAFGEDFYSYLKRCP--DAGRRFLLAMKASNLAFHEIP-RL-LDFR-GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMA---GDGRVVVIERTISASEP-S---PMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 1ZG3 Chain:A ((8-357)) | -----YHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG-------NENLNFVGGDMFKSIP-SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175464 for 2295 contacts (-76.5/contact) +
2D Compatibility (PS) -34046 + (NN) -14810 + (LL) 692
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -246628.0 ( -107.46 by residue)
QMean score : 0.502
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