Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRG------K------------G-LKSLVK---APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV-AGTA----NRSLAPIARRVCE----------------AFPDTFPA-----SDKRLTTGNPVRGELFLDAHARAP-LTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAE-ITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3OTG Chain:A ((20-408)) | -HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEG--FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSSGGTV--EVLRAAIDGLAG-LDADVLVASGPSLDVSGLG----EVPANVRLESWVPQ-AALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA----GDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176157 for 2933 contacts (-60.1/contact) +
2D Compatibility (PS) -36632 + (NN) -16696 + (LL) 1108
1D Compatibility (HY) -6800 + (ID) 3500
Total energy: -238677.0 ( -81.38 by residue)
QMean score : 0.449
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