Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKFMAWVDARFPATKMWEDHLSKYYAPKNFNFWYFFGSLALLVLVNQILTGIWLTMSFTPSAEEAFASVEYIMRDVDYGWIIRYMHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWIFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVVGEDLAQWIRGDFLISGITLNRFFALHVIALPIVLLGLVVLHILALHEVGSNNPDGVDIKKKKDENGVPLDGIAFHPYYTVKDIVGVVVFLFIFCTVIFFFPEMGGYFLEKPNFEMANQFKTPEHIAPVWYFTPFYAILRA------------------VPDKLMGVVAMGAAIAVLFVLPWLDRSPVRSIRYKGWLSKLWLVIFAVSFVILGYYGAQAPSPLGTTLSRVCTVLYFAFF-ILMPFYTRMEKTKPVPERVTG |
| 2QJK Chain:P ((16-422)) | ------WLHSRLPIVALAYDTI-MIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQK-DTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPN---YLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRP-MFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328111 for 2954 contacts (-111.1/contact) +
2D Compatibility (PS) -39815 + (NN) -22077 + (LL) 868
1D Compatibility (HY) -55600 + (ID) 9050
Total energy: -453785.0 ( -153.62 by residue)
QMean score : 0.463
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