Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
3KK0 Chain:A ((6-190))
-----LVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFKVHKKSGAEVVTGRLAGTTVVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVASALGTKN-FHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLIAQGLEPAQNTVHA---
General information:
TITO was launched using:
RESULT:
Template:
3KK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80133 for 1210 contacts (-66.2/contact) +
2D Compatibility (PS) -20224 + (NN) -11519 + (LL) 1016
1D Compatibility (HY) -8000 + (ID) 3550
Total energy: -122410.0 ( -101.17 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_3KK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KK0-query.scw
PDB file :
Tito_Scwrl_3KK0.pdb
: