Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDVELGEHEAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDPAMDSEHCGRCS-----ACLDICPTAAFVGPY------RLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCDDCQIVCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEWALRRHGET |
| 3GYX Chain:B ((5-62)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPEACW------------------------ECYSCIKICPQGAIT--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26981 for 266 contacts (-101.4/contact) +
2D Compatibility (PS) -4799 + (NN) -2412 + (LL) 20560
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -18682.0 ( -70.23 by residue)
QMean score : 0.329
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